Dual-role protein RelB offers hope and caution for IBD drug development

The same protein acts as both guardian and saboteur
RelB protects the gut in one location but worsens inflammation in another, complicating its potential as a drug target.
Mark

So this protein RelB is both helpful and harmful depending on where it is in the body?

Mimi

Exactly. In the intestinal wall, it builds immune cells that fight pathogens. But in the lymph nodes nearby, it suppresses the cells that calm inflammation. Same protein, opposite effects.

Luke

But we should be careful here—the study used engineered mice where RelB was completely removed from certain cells. That's not the same as blocking it with a drug, which would be partial and reversible.

Mark

Why does that matter?

Luke

Because a drug that partially blocks RelB might behave very differently than complete absence. We don't know yet.

Mimi

That's fair. The researchers themselves acknowledge we still don't know if RelB is needed to build these immune cells or just to keep them alive once they exist.

Mark

And that distinction matters for drug development?

Mimi

Enormously. If RelB is only needed for maintenance, you might be able to block it after the cells are formed. If it's needed for development, blocking it could prevent the cells from ever forming.

Luke

The other thing worth noting: IL-23 blocking drugs already work for inflammatory bowel disease. So the question isn't whether this pathway matters—it's whether targeting RelB specifically would be better or just create new problems.

Mark

Could it create new problems?

Mimi

That's the caution. If you block RelB to reduce inflammation, you might simultaneously weaken the gut's ability to fight actual infections.

Luke

Which is why they need to test this in humans eventually, not just mice.

  • A single protein, RelB, has been caught playing opposite roles in the same body — constructing immune defenders in the gut wall while suppressing the calming cells that prevent chronic inflammation nearby.
  • Without RelB, the specialized dendritic cells that produce the inflammatory alarm signal IL-23 nearly vanish entirely, suggesting the protein is essential not just for function but for the very existence of these immune outposts.
  • A second protein, RBP-J, was found to work in tandem with RelB, revealing that two signaling pathways long assumed to be independent must cooperate like interlocking gears to arm the gut properly.
  • The paradox may be explained by molecular competition: RelB is a weaker activator than its cousin RelA, so depending on which genes are in play, the same protein can either suppress or drive immune responses.
  • Drugs blocking IL-23 already treat IBD, but safely targeting RelB remains treacherous given its dual nature; researchers are now asking whether this same mechanism operates at other body barriers, including the lungs.

At the National Institute of Immunology in New Delhi, scientists have uncovered a protein called RelB that governs the gut's immune equilibrium — not as a simple switch, but as a force that builds defensive armies in one tissue while quietly dismantling peacekeeping forces in another. The discovery, published in the Proceedings of the National Academy of Sciences, illuminates why inflammatory bowel disease is so difficult to treat: the very mechanisms that protect us are entangled with the ones that harm us. In the long human search for healing, this finding reminds us that biology rarely offers clean villains or heroes, only context.

Deep within the intestinal wall lie tiny immune outposts that decide how fiercely the gut should respond to bacteria and microbes. Strike the balance wrong and disease follows — too little response and pathogens take hold; too much and the immune system attacks the gut itself, the hallmark of inflammatory bowel disease like Crohn's.

Researchers at the National Institute of Immunology in New Delhi have identified a protein called RelB as the fulcrum on which this balance tips. Their study, published in the Proceedings of the National Academy of Sciences, reveals something unsettling: the same protein that protects the gut in one location actively harms it in another. RelB acts as a gatekeeper for the gut's IL-23 system — the molecular alarm that triggers inflammation against threats. When scientists engineered mice lacking RelB in the relevant cells, the population of IL-23-producing dendritic cells nearly disappeared entirely, suggesting RelB is required to build this defensive force in the first place, not merely to tune its output.

Yet RelB is no straightforward guardian. While it constructs the gut's immune sentinels, it simultaneously suppresses regulatory T-cells in nearby lymph nodes — the peacekeepers that calm inflammation. The same protein, in different tissues, produces opposite effects. The researchers also discovered that RelB works with a second protein, RBP-J, to unlock a separate communication network, revealing that two signaling pathways long thought independent must cooperate to arm the gut properly.

Immunologist Alexander Hoffmann of UCLA suggests the paradox may come down to molecular competition: RelB is a weaker activator than its cousin RelA, so on genes where both compete, RelB effectively mutes the stronger signal. On genes RelA cannot reach, RelB's weaker touch is enough to drive expression. Same protein, same mechanism — opposite outcomes depending on the genetic terrain.

Because IL-23-blocking drugs already treat IBD, RelB is an intriguing but delicate potential target. Gastroenterologist Saurabh Mehandru of Mount Sinai cautions that mouse findings must be extended before reaching patients, and a key question remains: does RelB build these protective cells initially, or merely sustain them once formed? Basak's team is already planning to investigate whether this same relay operates at other vulnerable barriers, such as the lungs, and whether it might one day be carefully manipulated toward new treatments.

Deep in the intestinal wall, tucked beyond where food is broken down and nutrients slip into the bloodstream, lie tiny immune outposts called solitary isolated lymphoid tissues. These structures house cells that decide how fiercely the gut should react to bacteria and other microbes. Strike the balance wrong and you get disease: too weak a response and pathogens colonize; too strong and the immune system turns on the gut itself, the defining feature of inflammatory bowel disease like Crohn's.

Researchers at the National Institute of Immunology in New Delhi have identified a protein called RelB as the fulcrum on which this balance tips. But their discovery, published in the Proceedings of the National Academy of Sciences, reveals something troubling: the same protein that protects the gut in one location actively harms it in another. This dual nature could complicate efforts to develop new treatments for inflammatory bowel disease, even as it opens unexpected doors.

The gut's immune defense system relies heavily on a signaling molecule called IL-23, which functions like an alarm that triggers inflammation to ward off threats. When IL-23 works properly, it sparks a chain reaction that activates antimicrobial defenses. But when IL-23 production spirals out of control, it drives chronic inflammatory diseases including inflammatory bowel disease and psoriasis. The researchers found that RelB acts as a gatekeeper for this entire system. It determines whether the gut can even produce the specialized dendritic cells that live in those immune outposts and manufacture IL-23. When the team engineered mice lacking RelB in these cells, the population of IL-23-producing dendritic cells nearly disappeared.

Soumen Basak, the immunologist who led the study, explained that earlier research had suggested RelB simply helped existing cells produce more IL-23. But faced with cells that were almost entirely absent, the team dug deeper. They tested two possibilities: either the loss of RelB reduced the number of these specialized dendritic cells, or it merely impaired their ability to produce IL-23. The evidence pointed decisively to the first explanation. RelB was required to build the protective army in the first place.

Yet RelB does not play the hero everywhere. While it constructs this defensive force in the intestinal wall, it simultaneously suppresses regulatory T-cells in nearby lymph nodes. These regulatory cells are the immune system's peacekeepers, the ones that calm inflammation. By shutting them down, RelB worsens chronic intestinal inflammation. The same protein, in different neighborhoods of the body, produces opposite effects.

The explanation may lie in the nature of dendritic cells themselves. These are not fixed entities with a single job. They are shapeshifters that adopt different identities depending on the tissue they inhabit and the chemical signals present there. RelB helps establish that local identity, a role that represents a significant conceptual shift in how scientists understand immune development. The researchers discovered that RelB activates a second protein called RBP-J, which acts as a key unlocking a different communication network. Only when this connection is complete can immature cells develop into the gut's specialized IL-23-producing sentinels. Two signaling systems long thought to operate independently actually cooperate to arm the gut.

But the paradox remains: how does a single protein act as a brake in one context and an accelerator in another? Alexander Hoffmann, a professor of immunology at UCLA, suggests the answer involves competition. RelB is a relatively weak activator compared to its cousin, RelA. When both proteins compete for access to the same gene, the weaker RelB blocks RelA's strong signal, effectively dialing down the overall effect so it appears to suppress. But on genes that RelA cannot reach, RelB's weak activation is sufficient to drive gene expression. The same protein, same mechanism, opposite outcomes depending on the genetic landscape.

Drugs that block IL-23 are already frontline treatments for inflammatory bowel disease, making RelB an intriguing but delicate potential target. Because the protein acts as both guardian and saboteur depending on its location, safely targeting it remains extraordinarily complex. Saurabh Mehandru, a gastroenterologist at Mount Sinai, notes that because this research used mice, the findings will need to be extended before they can be directly applied to patient care. He also points to a remaining gap: because the protective cells are almost entirely missing in the modified mice, it is unclear whether RelB is required to build those cells initially or simply to keep them alive once formed. Future experiments tracking cell lifespans will settle that question. Basak's team is already planning the next phase, investigating whether this relay operates at other vulnerable barriers like the lungs and whether manipulating it could yield new treatments.

Making a delicious dish requires the right combination of many ingredients—each contributes a unique flavor, but none can produce the desired taste on its own. Signaling pathways must work together in a coordinated manner.
— Soumen Basak, National Institute of Immunology
RelB is a relatively weak activator compared to its cousin RelA. When both compete for the same gene, the weaker RelB blocks RelA's strong signal, appearing to suppress. But on genes RelA cannot access, RelB's weak activation is sufficient to drive gene expression.
— Alexander Hoffmann, UCLA
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